Captain Barry then "made for the Delaware." Though her bottom was "perfectly sound when bore down at Providence," Barry believed the run on the rock caused the leak. The damage to the "Alliance" was serious enough to warrant Congress appointing a committee to examine the condition of the ship. On September on their report Congress ordered the ship "to be unladen and her cargo freighted to Europe on the best terms." The Agent of Marine was directed to discharge officers and crew, have her surveyed and a report made of the expense "necessary to give her a good repair." Five hundred hogsheads of the tobacco were reshipped on the "Princess Ulrico" [480 hhds.] and the "Four Friends" [20 hhds.].
Had the voyage to Amsterdam been made, Barry would have stopped at London. Robert Morris gave him a (July 24, 1783) letter of introduction to Messrs. Bewickes & Mourgue of that city stating that: "He has proved himself a brave and deserving officer in the service of his country and a worthy man in every station of life." (Crimmin's Autographs.) He also had a letter from John Paul Jones to friends in Paris.
In pursuance of the Act, Robert Morris, Agent of Marine, appointed as surveyors Captains John Barry and Thomas Read and Messrs. Thomas Penrose, Joshua Humphreys, Jr., and Benjamin G. Eyre. The latter were shipbuilders. They estimated the repairs would cost 5866-2/3 dollars--that it was not necessary to keep the "Alliance" for the protection of commerce and it would be to the interest of the Union to dispose of her. A resolution to direct the Agent of Marine to dispose of her by public auction was adopted on June 3, 1785. She was sold on August 1, 1785. So Congress parted with its last and its best vessel. The new Nation was without a ship or flag on the ocean. Captain Barry had the first Continental vessel. He commanded the last one. Great must have been his satisfaction when given the "Lexington." Sad, indeed, must he have been in parting with the "Alliance."
She was purchased by Coburn & Whitehead for £2287 or $7,700 in certificates of public credit. They sold to Robert Morris "at a great profit." She became a merchant vessel and in June, 1787, made a voyage to China, returning September, 1788. She was of 724 tons--a large ship for those days. After all her perilous voyages and wonderful escapes from the enemy she was beached on Petty's Island in the Delaware River opposite Kensington, Philadelphia. Part of her timbers remained until 1901 and her hulk was visible at low tide. The widening of the channel caused the removal of what remained of her hulk. Pieces are preserved at the Museum of Independence Hall, where it is labeled as having been commanded by John Paul Jones. Another portion is at the American Catholic Historical Society of Philadelphia. There also may be seen the card table and soup tureen of the Commodore, deposited by the compiler of this record.